席瑞斌

个人概况

姓    名:席瑞斌

职    称:研究员

职    务:

研究方向:统计理论和算法,计算基因组学和生物信息学。

通信地址:北京大学数学科学学院

电    话:62744200

电子邮件:ruibinxi@math.pku.edu.cn

教育情况

1.2005/8–2009/8, 圣路易斯华盛顿大学, 数学, 博士, 导师:Nan Lin

2.2002/9–2005/7, 北京大学, 数学, 硕士, 导师:文兰

3.1998/9–2002/7, 内蒙古大学, 数学, 学士

工作经历

1.2012/9-至今,北京大学,数学科学学院,研究员

2.2009/8-2012/8,哈佛大学医学院,博士后,合作导师:Peter Park

科研项目(973、科技部重点研发计划等)

1. 国家自然科学基金重点项目大数据驱动的管理决策模型与算法,批准号71532001,260万,2016-01-01到2020-12-31,在研,参与

2. 国家科技部973项目,批准号2015CB856000,非结构数据的统计学习:数学基础及算法 ,2015-01-01到2019-12-31,1000万,在研,参与

3. 国家自然科学基金面上项目,批准号11471022,基于高通量测序数据研究基因组变异 的统计问题,2015-01-01到2018-12-31,60万,在研,主持

4. 2013年中组部青年人才项目,200万,主持

著作文集(期刊专著等)

(1) Chang, J.#, Tan, W.#, Ling, Z.#, Xi, R.#, Shao, M. # … Mao, W.*, Wu, C.* and Lin, D. (2017) Comprehensive analysis of esophageal squamous-cell carcinoma identifies alcohol drinking-related mutation signature and novel genomic alterations. Nature Communications, 8:15290

(2) Xia, Y., Liu, Y., Deng, M. and Xi, R.* (2017) SVmine improves structural variation detection by integrative mining of predictions from multiple algorithms, Bioinformatics , 1;33(21):3348-3354.

(3) Yuan, H. Xi, R.*, Chen, C. and Deng, M.* (2017) Differential network analysis via lasso penalized D-trace loss, Biometrika , 104 (4):755-770.

(4) Xi, R.*, Lee, S., Xia, Y., Kim, T. and Park, P.* (2016) Copy number analysis of whole-genome data using BIC-seq2 and its application to detection of cancer susceptibility variants, Nucleic Acids Research, 44(13):6274-86.

(5) De Los Angeles#, A., Ferrari, F.#, Xi, R., Fujiwara, Y., Benvenisty, N., Deng, H., Hochedlinger, K., Jaenisch, R., Lee, S., Leitch, H.G., Lensch, M. W., Lujan, E., Pei, D., Rossant, J., Wernig, M., Park, P.J., Daley, G.Q. (2015) Hallmarks of pluripotency, Nature, 525 (7570), 469-478.

学术荣誉(获奖情况)

(1) Tan, X. , Hu, L., Luquette, L. J, Gao, G., Liu, Y., Qu, H., Xi, R., Lu, Z.J., Park, P., Elledge, S.J.* (2012), Systematic identification of synergistic drug pairs targeting HIV, Nature Biotechnology, 30:1125-1130

(2) The Cancer Genome Atlas Research Network (Including Xi, R.) (2012), Comprehensive genomic characterization of squamous cell lung cancers, Nature, 489:519-525.

(3) The Cancer Genome Atlas Research Network (Including Xi, R.) (2012). Comprehensive molecular characterization of human colon and rectal tumors, Nature, 487:330-337.

(4) Xi, R., Lee, S., Park, P.* (2012), A Survey of Copy Number Variation Detection Tools Based on High-throughput sequencing data, Current Protocols in Human Genetics,

(5) Xi, R., Lin, N., Chen, Y.* and Kim (2012), Y. Compression and Aggregation of Bayesian Estimates for Data Intensive Computing; Knowledge and Information Systems Knowledge and Information Systems, 33(1), 191-212.

社会服务(社会兼职、杂志编委等)